Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two-component system, ompr family, sensor histidine kinase kdpd | SAMN06297358_0751 | Not Available | Negative | 957029 - 958147 | 42196.3 |
| putative beta-barrel porin-2, ompl-like. bbp2 | SAMN06297358_0752 | Not Available | Negative | 958149 - 959213 | 39982.1 |
| k+-transporting atpase atpase c chain | SAMN06297358_0753 | Not Available | Negative | 959597 - 960163 | 20337.0 |
| k+-transporting atpase atpase b chain | SAMN06297358_0754 | Not Available | Negative | 960380 - 962413 | 71885.0 |
| k+-transporting atpase atpase a chain | SAMN06297358_0755 | Not Available | Negative | 962415 - 964133 | 62166.8 |
| dna-binding transcriptional response regulator, ntrc family, contains rec, aaa-type atpase, and a fis-type dna-binding domains | SAMN06297358_0756 | Not Available | Negative | 964629 - 965954 | 48905.4 |
| por secretion system c-terminal sorting domain-containing protein | SAMN06297358_0757 | Not Available | Negative | 966085 - 969105 | 103355.0 |
| tonb-linked outer membrane protein, susc/raga family | SAMN06297358_0758 | Not Available | Positive | 969696 - 972782 | 112971.0 |
| ragb/susd domain-containing protein | SAMN06297358_0759 | Not Available | Positive | 972824 - 974197 | 51446.9 |
| hypothetical protein | SAMN06297358_0760 | Not Available | Positive | 974213 - 975535 | 50587.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

