Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06297358_0741 | Not Available | Negative | 941049 - 941708 | 25824.9 |
| alpha-amylase | SAMN06297358_0742 | Not Available | Negative | 941794 - 943278 | 56525.9 |
| hypothetical protein | SAMN06297358_0743 | Not Available | Positive | 943547 - 943732 | 6853.17 |
| mtn3 and saliva related transmembrane protein | SAMN06297358_0744 | Not Available | Negative | 943795 - 944025 | 8410.54 |
| hypothetical protein | SAMN06297358_0745 | Not Available | Positive | 944174 - 944425 | 9448.41 |
| pas domain s-box-containing protein | SAMN06297358_0746 | Not Available | Negative | 944486 - 948196 | 138153.0 |
| signal transduction histidine kinase | SAMN06297358_0747 | Not Available | Positive | 948604 - 951261 | 100425.0 |
| hypothetical protein | SAMN06297358_0748 | Not Available | Negative | 951348 - 951599 | 9759.99 |
| cytochrome c-type biogenesis protein ccsb | SAMN06297358_0749 | Not Available | Negative | 951820 - 955131 | 123907.0 |
| pas/pac sensor signal transduction histidine kinase | SAMN06297358_0750 | Not Available | Negative | 955279 - 957018 | 65110.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

