Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gaf domain-containing protein | SAMN06297358_0731 | Not Available | Negative | 928915 - 930444 | 57846.1 |
| cyanophycin synthetase | SAMN06297358_0732 | Not Available | Negative | 930784 - 933405 | 96462.0 |
| cyanophycinase | SAMN06297358_0733 | Not Available | Positive | 933677 - 934549 | 31510.2 |
| l-asparaginase | SAMN06297358_0734 | Not Available | Positive | 934675 - 935517 | 29836.1 |
| putative mg2+ transporter-c (mgtc) family protein | SAMN06297358_0735 | Not Available | Negative | 935565 - 936200 | 22866.6 |
| hypothetical protein | SAMN06297358_0736 | Not Available | Negative | 936393 - 937262 | 33563.1 |
| ompa-ompf porin, oop family | SAMN06297358_0737 | Not Available | Positive | 937902 - 939239 | 48011.4 |
| hypothetical protein | SAMN06297358_0738 | Not Available | Negative | 939755 - 940039 | 10871.1 |
| hypothetical protein | SAMN06297358_0739 | Not Available | Negative | 940195 - 940413 | 8479.16 |
| protein of unknown function | SAMN06297358_0740 | Not Available | Negative | 940442 - 940939 | 18851.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

