Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN06297358_0720 | Not Available | Positive | 905971 - 909027 | 110004.0 |
| por secretion system c-terminal sorting domain-containing protein | SAMN06297358_0721 | Not Available | Positive | 909038 - 911230 | 75928.1 |
| carbon starvation protein | SAMN06297358_0722 | Not Available | Positive | 911408 - 913249 | 66930.8 |
| sialate o-acetylesterase | SAMN06297358_0723 | Not Available | Positive | 913368 - 915320 | 72976.2 |
| pas domain s-box-containing protein | SAMN06297358_0724 | Not Available | Positive | 916882 - 919353 | 93402.5 |
| lipocalin-like domain-containing protein | SAMN06297358_0725 | Not Available | Negative | 919698 - 920117 | 16210.1 |
| conserved hypothetical protein | SAMN06297358_0726 | Not Available | Positive | 920702 - 921148 | 15919.4 |
| fad-nad(p)-binding | SAMN06297358_0727 | Not Available | Positive | 921237 - 922964 | 64938.0 |
| protein of unknown function | SAMN06297358_0728 | Not Available | Positive | 922985 - 923575 | 22206.4 |
| two-component system, chemotaxis family, cheb/cher fusion protein | SAMN06297358_0730 | Not Available | Negative | 924074 - 928903 | 182505.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

