Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fasciclin domain-containing protein | SAMN06297358_0710 | Not Available | Positive | 888695 - 889354 | 24322.3 |
| hypothetical protein | SAMN06297358_0711 | Not Available | Positive | 889376 - 890944 | 57835.1 |
| fad dependent oxidoreductase | SAMN06297358_0712 | Not Available | Positive | 891012 - 893003 | 74481.7 |
| glycosyl hydrolases family 28 | SAMN06297358_0713 | Not Available | Positive | 893013 - 894464 | 53557.0 |
| fad dependent oxidoreductase | SAMN06297358_0714 | Not Available | Positive | 894464 - 896257 | 66632.1 |
| alpha-1,2-mannosidase, putative | SAMN06297358_0715 | Not Available | Positive | 896269 - 898437 | 80057.0 |
| sialate o-acetylesterase | SAMN06297358_0716 | Not Available | Positive | 898446 - 899903 | 53870.1 |
| alpha-1,2-mannosidase, putative | SAMN06297358_0717 | Not Available | Positive | 899910 - 902087 | 82411.0 |
| hypothetical protein | SAMN06297358_0718 | Not Available | Positive | 902124 - 902693 | 19823.4 |
| protein of unknown function | SAMN06297358_0719 | Not Available | Positive | 902836 - 905877 | 108190.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

