Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chitinase, gh18 family | SAMN06297358_0700 | Not Available | Negative | 868286 - 869350 | 38118.5 |
| arac-type dna-binding protein | SAMN06297358_0701 | Not Available | Negative | 869738 - 870703 | 36831.9 |
| 2-polyprenyl-6-methoxyphenol hydroxylase | SAMN06297358_0702 | Not Available | Positive | 871379 - 872536 | 43363.7 |
| hypothetical protein | SAMN06297358_0703 | Not Available | Positive | 872588 - 873046 | 17583.8 |
| por secretion system c-terminal sorting domain-containing protein | SAMN06297358_0704 | Not Available | Positive | 873527 - 875260 | 61561.5 |
| glucokinase | SAMN06297358_0705 | Not Available | Positive | 876592 - 877452 | 31858.2 |
| alpha-galactosidase | SAMN06297358_0706 | Not Available | Positive | 877479 - 879443 | 72113.9 |
| signal transduction histidine kinase | SAMN06297358_0707 | Not Available | Negative | 879769 - 883659 | 148132.0 |
| tonb-linked outer membrane protein, susc/raga family | SAMN06297358_0708 | Not Available | Positive | 883955 - 887173 | 118035.0 |
| starch-binding associating with outer membrane | SAMN06297358_0709 | Not Available | Positive | 887230 - 888684 | 54594.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

