Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06297358_0679 | Not Available | Negative | 842231 - 842632 | 15596.6 |
| short chain dehydrogenase | SAMN06297358_0680 | Not Available | Negative | 842718 - 843362 | 23595.5 |
| uncharacterized membrane protein | SAMN06297358_0681 | Not Available | Negative | 843568 - 844422 | 30918.6 |
| transcriptional regulator, laci family | SAMN06297358_0682 | Not Available | Positive | 844652 - 845713 | 40572.6 |
| hypothetical protein | SAMN06297358_0683 | Not Available | Positive | 845894 - 846184 | 11726.4 |
| tonb-linked outer membrane protein, susc/raga family | SAMN06297358_0684 | Not Available | Positive | 846252 - 849506 | 119296.0 |
| starch-binding associating with outer membrane | SAMN06297358_0685 | Not Available | Positive | 849550 - 851133 | 59321.4 |
| glycosyl hydrolases family 18 | SAMN06297358_0686 | Not Available | Positive | 851232 - 852662 | 51809.7 |
| chitinase, gh18 family | SAMN06297358_0687 | Not Available | Positive | 852662 - 853639 | 36951.5 |
| chitinase, gh18 family | SAMN06297358_0688 | Not Available | Positive | 853648 - 854682 | 39131.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

