Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type 2 lantibiotic biosynthesis protein lanm | SAMN06297358_0668 | Not Available | Negative | 826643 - 829702 | 118148.0 |
| hypothetical protein | SAMN06297358_0669 | Not Available | Negative | 829759 - 829947 | 6686.95 |
| glycosyl transferases group 1 | SAMN06297358_0670 | Not Available | Negative | 830018 - 831181 | 44391.8 |
| starch-binding associating with outer membrane | SAMN06297358_0672 | Not Available | Negative | 832763 - 834595 | 69894.4 |
| tonb-linked outer membrane protein, susc/raga family | SAMN06297358_0673 | Not Available | Negative | 834628 - 838029 | 125748.0 |
| fecr family protein | SAMN06297358_0674 | Not Available | Negative | 838226 - 839293 | 40527.5 |
| hypothetical protein | SAMN06297358_0675 | Not Available | Negative | 839339 - 839488 | 5705.09 |
| rna polymerase sigma factor, sigma-70 family | SAMN06297358_0676 | Not Available | Negative | 839637 - 840224 | 23785.3 |
| hypothetical protein | SAMN06297358_0677 | Not Available | Negative | 840235 - 840474 | 9347.54 |
| transcriptional regulator, arac family | SAMN06297358_0678 | Not Available | Negative | 841327 - 842229 | 34367.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

