Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dimethylhistidine n-methyltransferase | SAMN06297358_0656 | Not Available | Positive | 813188 - 814273 | 41105.3 |
| ergothioneine biosynthesis protein egtb | SAMN06297358_0657 | Not Available | Positive | 814312 - 815466 | 44734.8 |
| pas domain s-box-containing protein | SAMN06297358_0659 | Not Available | Positive | 816309 - 817412 | 41090.1 |
| hypothetical protein | SAMN06297358_0660 | Not Available | Negative | 817462 - 817704 | 9268.23 |
| response regulator receiver domain-containing protein | SAMN06297358_0661 | Not Available | Negative | 817815 - 818186 | 13831.4 |
| hypothetical protein | SAMN06297358_0663 | Not Available | Positive | 819140 - 819664 | 19693.8 |
| outer membrane receptor proteins, mostly fe transport | SAMN06297358_0664 | Not Available | Negative | 820057 - 822438 | 89681.3 |
| hypothetical protein | SAMN06297358_0665 | Not Available | Negative | 822441 - 823463 | 39345.1 |
| hypothetical protein | SAMN06297358_0666 | Not Available | Negative | 823480 - 824430 | 35879.8 |
| atp-binding cassette, subfamily b | SAMN06297358_0667 | Not Available | Negative | 824441 - 826639 | 82523.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

