Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phage integrase sam-like domain-containing protein | SAMN06297358_0645 | Not Available | Negative | 797862 - 799193 | 50614.2 |
| resolvase, n terminal domain | SAMN06297358_0646 | Not Available | Negative | 799331 - 800152 | 32536.5 |
| hypothetical protein | SAMN06297358_0648 | Not Available | Negative | 801657 - 801884 | 8292.89 |
| exodeoxyribonuclease-3 | SAMN06297358_0649 | Not Available | Negative | 801881 - 802660 | 29770.7 |
| tetratricopeptide repeat-containing protein | SAMN06297358_0650 | Not Available | Positive | 803535 - 805559 | 76015.8 |
| two component transcriptional regulator, luxr family | SAMN06297358_0651 | Not Available | Positive | 805552 - 806196 | 23919.5 |
| hypothetical protein | SAMN06297358_0652 | Not Available | Positive | 806269 - 807279 | 36390.8 |
| hypothetical protein | SAMN06297358_0653 | Not Available | Positive | 807341 - 809119 | 63878.1 |
| hypothetical protein | SAMN06297358_0654 | Not Available | Positive | 809153 - 812188 | 107232.0 |
| hypothetical protein | SAMN06297358_0655 | Not Available | Negative | 812428 - 812739 | 11245.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

