Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-arg | Not Available | Not Available | Positive | 791152 - 791225 | Not Available |
| hypothetical protein | SAMN06297358_0636 | Not Available | Negative | 791324 - 791791 | 17729.7 |
| helix-turn-helix | SAMN06297358_0637 | Not Available | Positive | 791893 - 792120 | 8485.45 |
| hypothetical protein | SAMN06297358_0638 | Not Available | Negative | 792134 - 792808 | 25882.6 |
| hypothetical protein | SAMN06297358_0639 | Not Available | Negative | 793294 - 793854 | 21475.9 |
| protein of unknown function | SAMN06297358_0640 | Not Available | Negative | 793856 - 794188 | 12771.3 |
| hypothetical protein | SAMN06297358_0641 | Not Available | Negative | 794181 - 795581 | 54672.9 |
| hypothetical protein | SAMN06297358_0642 | Not Available | Negative | 795829 - 796773 | 37052.1 |
| dna binding domain-containing protein, excisionase family | SAMN06297358_0643 | Not Available | Negative | 796770 - 797054 | 10561.7 |
| hypothetical protein | SAMN06297358_0644 | Not Available | Negative | 797154 - 797858 | 27602.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

