Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| beta-galactosidase | SAMN06297358_0625 | Not Available | Positive | 773781 - 776441 | 99922.0 |
| beta-galactosidase | SAMN06297358_0626 | Not Available | Positive | 776810 - 779275 | 92679.2 |
| alginate lyase | SAMN06297358_0627 | Not Available | Positive | 779359 - 780522 | 44501.7 |
| hypothetical protein | SAMN06297358_0628 | Not Available | Positive | 780524 - 782026 | 55153.8 |
| rhamnogalacturonyl hydrolase yesr | SAMN06297358_0629 | Not Available | Positive | 782162 - 783340 | 44601.8 |
| uncharacterized membrane protein yccc | SAMN06297358_0630 | Not Available | Positive | 783763 - 785796 | 76670.8 |
| hypothetical protein | SAMN06297358_0631 | Not Available | Positive | 785828 - 786049 | 7867.51 |
| hypothetical protein | SAMN06297358_0632 | Not Available | Positive | 786127 - 786567 | 16546.4 |
| superfamily ii dna or rna helicase, snf2 family | SAMN06297358_0633 | Not Available | Positive | 786771 - 789695 | 113017.0 |
| mannonate dehydratase | SAMN06297358_0634 | Not Available | Positive | 789880 - 791055 | 43945.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

