Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06297358_0605 | Not Available | Positive | 745189 - 746469 | 45274.0 |
| 3',5'-cyclic amp phosphodiesterase cpda | SAMN06297358_0606 | Not Available | Positive | 746543 - 747958 | 53585.9 |
| glycerophosphoryl diester phosphodiesterase | SAMN06297358_0607 | Not Available | Positive | 748060 - 748962 | 33877.3 |
| mfs transporter, opa family, glycerol-3-phosphate transporter | SAMN06297358_0608 | Not Available | Positive | 749087 - 750454 | 50653.0 |
| lysophospholipase l1 | SAMN06297358_0609 | Not Available | Positive | 750465 - 751151 | 26289.1 |
| hypothetical protein | SAMN06297358_0610 | Not Available | Negative | 751267 - 751716 | 17002.6 |
| dna-binding transcriptional regulator, xre-family hth domain | SAMN06297358_0611 | Not Available | Negative | 751878 - 752654 | 29487.2 |
| putative endonuclease | SAMN06297358_0612 | Not Available | Positive | 752787 - 753131 | 13514.5 |
| component of the tol biopolymer transport system | SAMN06297358_0613 | Not Available | Negative | 753216 - 756344 | 117729.0 |
| penicillin-binding protein 1a | SAMN06297358_0614 | Not Available | Negative | 756396 - 758849 | 93640.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

