Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cation diffusion facilitator family transporter | SAMN06297358_0595 | Not Available | Positive | 731026 - 732003 | 36110.9 |
| 8-oxo-dgtp pyrophosphatase mutt, nudix family | SAMN06297358_0596 | Not Available | Positive | 732000 - 732437 | 16901.0 |
| hypothetical protein | SAMN06297358_0597 | Not Available | Positive | 732437 - 733312 | 32927.1 |
| signal transduction histidine kinase | SAMN06297358_0598 | Not Available | Positive | 733389 - 735167 | 67345.3 |
| glycerol uptake facilitator protein | SAMN06297358_0599 | Not Available | Negative | 735164 - 735895 | 25549.6 |
| glycerol kinase | SAMN06297358_0600 | Not Available | Negative | 735981 - 737465 | 54082.6 |
| glycerol-3-phosphate dehydrogenase | SAMN06297358_0601 | Not Available | Negative | 737488 - 739080 | 59017.0 |
| transcriptional regulator, deor family | SAMN06297358_0602 | Not Available | Positive | 739232 - 739993 | 28002.9 |
| tonb-linked outer membrane protein, susc/raga family | SAMN06297358_0603 | Not Available | Positive | 740374 - 743670 | 119156.0 |
| starch-binding associating with outer membrane | SAMN06297358_0604 | Not Available | Positive | 743691 - 745178 | 56031.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

