Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase family m48 | SAMN06297358_0048 | Not Available | Positive | 50142 - 50948 | 28651.3 |
| para-aminobenzoate synthetase component 1 | SAMN06297358_0049 | Not Available | Negative | 50987 - 52243 | 47981.5 |
| hypothetical protein | SAMN06297358_0050 | Not Available | Positive | 52327 - 52923 | 22338.1 |
| adenylosuccinate synthetase | SAMN06297358_0051 | Not Available | Negative | 52975 - 54252 | 46636.1 |
| fur family transcriptional regulator, ferric uptake regulator | SAMN06297358_0052 | Not Available | Negative | 54293 - 54781 | 19014.8 |
| four helix bundle protein | SAMN06297358_0053 | Not Available | Negative | 54926 - 55282 | 13856.0 |
| gtp pyrophosphokinase | SAMN06297358_0054 | Not Available | Negative | 55314 - 57524 | 83705.0 |
| protein of unknown function | SAMN06297358_0055 | Not Available | Positive | 57549 - 58253 | 27317.6 |
| glutathione peroxidase | SAMN06297358_0056 | Not Available | Positive | 58263 - 58769 | 19271.2 |
| bacillithiol biosynthesis deacetylase bshb1 | SAMN06297358_0057 | Not Available | Positive | 58853 - 59569 | 26798.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

