Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06297358_0564 | Not Available | Negative | 694818 - 695615 | 30335.7 |
| hepn domain-containing protein | SAMN06297358_0565 | Not Available | Negative | 695617 - 697281 | 62311.9 |
| hypothetical protein | SAMN06297358_0566 | Not Available | Negative | 697287 - 697970 | 25931.8 |
| dna-binding transcriptional regulator, xre-family hth domain | SAMN06297358_0567 | Not Available | Positive | 698096 - 698482 | 14681.6 |
| radc-like jab domain-containing protein | SAMN06297358_0568 | Not Available | Negative | 698550 - 699008 | 17070.6 |
| hnh endonuclease | SAMN06297358_0569 | Not Available | Negative | 699387 - 700472 | 42142.8 |
| adenine-specific methyltransferase ecori | SAMN06297358_0570 | Not Available | Negative | 700469 - 701578 | 42678.1 |
| hypothetical protein | SAMN06297358_0571 | Not Available | Negative | 701926 - 702873 | 36463.4 |
| hypothetical protein | SAMN06297358_0572 | Not Available | Negative | 702875 - 703429 | 21545.5 |
| hypothetical protein | SAMN06297358_0573 | Not Available | Negative | 703640 - 703939 | 11296.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

