Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-l-fucosidase 2 | SAMN06297358_0524 | Not Available | Positive | 632723 - 635182 | 91717.4 |
| hypothetical protein | SAMN06297358_0525 | Not Available | Negative | 635183 - 637723 | 99070.3 |
| hypothetical protein | SAMN06297358_0526 | Not Available | Positive | 637792 - 637902 | 4064.28 |
| gliding motility-associated c-terminal domain-containing protein | SAMN06297358_0527 | Not Available | Positive | 638022 - 646826 | 303244.0 |
| type ix secretion system membrane protein, porp/sprf family | SAMN06297358_0528 | Not Available | Positive | 646870 - 647865 | 35737.9 |
| tetratricopeptide repeat-containing protein | SAMN06297358_0529 | Not Available | Positive | 647877 - 649901 | 75859.9 |
| hypothetical protein | SAMN06297358_0530 | Not Available | Negative | 649990 - 650526 | 20377.3 |
| two component transcriptional regulator, luxr family | SAMN06297358_0531 | Not Available | Negative | 650693 - 651361 | 25143.7 |
| hypothetical protein | SAMN06297358_0532 | Not Available | Positive | 651588 - 651998 | 14994.7 |
| hypothetical protein | SAMN06297358_0533 | Not Available | Positive | 652164 - 652799 | 24301.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

