Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-fucose dehydrogenase | SAMN06297358_0504 | Not Available | Positive | 602508 - 603296 | 28408.0 |
| l-lactate dehydrogenase (cytochrome) | SAMN06297358_0505 | Not Available | Positive | 603309 - 604457 | 42354.2 |
| hypothetical protein | SAMN06297358_0506 | Not Available | Negative | 604550 - 604735 | 6727.89 |
| hypothetical protein | SAMN06297358_0507 | Not Available | Positive | 605178 - 605495 | 11324.6 |
| hypothetical protein | SAMN06297358_0508 | Not Available | Positive | 605519 - 605851 | 12229.2 |
| stress responsive a/b barrel domain | SAMN06297358_0509 | Not Available | Negative | 605964 - 606377 | 16043.5 |
| lrp/asnc family transcriptional regulator, leucine-responsive regulatory protein/lrp/asnc family transcriptional regulator | SAMN06297358_0510 | Not Available | Negative | 606454 - 606915 | 17512.1 |
| methionine synthase (b12-independent) | SAMN06297358_0511 | Not Available | Positive | 607437 - 609749 | 87213.9 |
| hypothetical protein | SAMN06297358_0512 | Not Available | Positive | 610062 - 610730 | 25065.5 |
| two-component system, cell cycle response regulator divk | SAMN06297358_0513 | Not Available | Positive | 610815 - 611198 | 13960.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

