Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06297358_0484 | Not Available | Negative | 575331 - 575486 | 6086.56 |
| alpha-l-fucosidase | SAMN06297358_0485 | Not Available | Negative | 575610 - 576965 | 51189.7 |
| alpha-l-fucosidase | SAMN06297358_0486 | Not Available | Negative | 576969 - 578360 | 52724.4 |
| beta-glucosidase | SAMN06297358_0487 | Not Available | Negative | 578380 - 580683 | 84984.2 |
| hypothetical protein | SAMN06297358_0488 | Not Available | Negative | 580939 - 582093 | 42515.1 |
| starch-binding associating with outer membrane | SAMN06297358_0489 | Not Available | Negative | 582134 - 583855 | 64526.3 |
| tonb-linked outer membrane protein, susc/raga family | SAMN06297358_0490 | Not Available | Negative | 583867 - 587139 | 120542.0 |
| arac-type dna-binding protein | SAMN06297358_0491 | Not Available | Negative | 587665 - 588546 | 33936.9 |
| na+/proline symporter | SAMN06297358_0492 | Not Available | Positive | 588758 - 590590 | 68684.0 |
| 4-o-beta-d-mannosyl-d-glucose phosphorylase | SAMN06297358_0493 | Not Available | Positive | 590622 - 591827 | 45159.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

