Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| solute:na+ symporter, sss family | SAMN06297358_0473 | Not Available | Negative | 557531 - 559207 | 60928.9 |
| galactokinase | SAMN06297358_0474 | Not Available | Negative | 559280 - 560434 | 42417.9 |
| udpglucose--hexose-1-phosphate uridylyltransferase | SAMN06297358_0475 | Not Available | Negative | 560415 - 561491 | 41528.1 |
| adp-ribose pyrophosphatase yjhb, nudix family | SAMN06297358_0476 | Not Available | Positive | 561635 - 562339 | 26999.6 |
| arac-type dna-binding protein | SAMN06297358_0478 | Not Available | Negative | 562947 - 563891 | 36570.0 |
| por secretion system c-terminal sorting domain-containing protein | SAMN06297358_0479 | Not Available | Positive | 564245 - 568294 | 148113.0 |
| lysophospholipase l1 | SAMN06297358_0480 | Not Available | Negative | 568783 - 570168 | 52324.0 |
| endoglucanase | SAMN06297358_0481 | Not Available | Negative | 570178 - 571203 | 38630.3 |
| cellulase (glycosyl hydrolase family 5) | SAMN06297358_0482 | Not Available | Positive | 571418 - 572506 | 41785.2 |
| beta-glucosidase | SAMN06297358_0483 | Not Available | Negative | 572885 - 575305 | 89305.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

