Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| por secretion system c-terminal sorting domain-containing protein | SAMN06297358_0463 | Not Available | Positive | 544834 - 550689 | 211693.0 |
| hypothetical protein | SAMN06297358_0464 | Not Available | Positive | 550689 - 551357 | 24629.1 |
| transcriptional regulator, hxlr family | SAMN06297358_0465 | Not Available | Negative | 551648 - 552013 | 14023.2 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN06297358_0466 | Not Available | Positive | 552138 - 552932 | 27955.5 |
| hypothetical protein | SAMN06297358_0467 | Not Available | Positive | 552953 - 553267 | 11832.1 |
| hypothetical protein | SAMN06297358_0468 | Not Available | Positive | 553709 - 554275 | 21715.1 |
| arac-type dna-binding protein | SAMN06297358_0469 | Not Available | Negative | 554299 - 555114 | 31446.5 |
| hypothetical protein | SAMN06297358_0470 | Not Available | Positive | 555130 - 555951 | 30043.5 |
| hypothetical protein | SAMN06297358_0471 | Not Available | Positive | 555948 - 556256 | 11204.6 |
| polyisoprenoid-binding protein ycei | SAMN06297358_0472 | Not Available | Positive | 556672 - 557343 | 23644.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

