Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susd family protein | SAMN06297358_0453 | Not Available | Positive | 532136 - 533593 | 54710.6 |
| hypothetical protein | SAMN06297358_0454 | Not Available | Positive | 533598 - 534056 | 17190.8 |
| zinc protease | SAMN06297358_0455 | Not Available | Positive | 534059 - 536869 | 106516.0 |
| hypothetical protein | SAMN06297358_0456 | Not Available | Positive | 536875 - 538644 | 64297.4 |
| hypothetical protein | SAMN06297358_0457 | Not Available | Negative | 538815 - 538937 | 4886.28 |
| regulator of nucleoside diphosphate kinase | SAMN06297358_0458 | Not Available | Negative | 539054 - 539446 | 14952.9 |
| catalase-peroxidase | SAMN06297358_0459 | Not Available | Negative | 540419 - 542692 | 83064.7 |
| hypothetical protein | SAMN06297358_0460 | Not Available | Negative | 542870 - 543187 | 12186.9 |
| putative hydrolase of the had superfamily | SAMN06297358_0461 | Not Available | Negative | 543474 - 544109 | 24446.9 |
| Trna-met | Not Available | Not Available | Positive | 544366 - 544439 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

