Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function duf58 | SAMN06297358_0432 | Not Available | Negative | 508548 - 509435 | 33927.7 |
| moxr-like atpase | SAMN06297358_0433 | Not Available | Negative | 509435 - 510481 | 38953.3 |
| protein of unknown function | SAMN06297358_0434 | Not Available | Positive | 510584 - 511213 | 23865.3 |
| aspartate aminotransferase | SAMN06297358_0435 | Not Available | Negative | 511282 - 512478 | 44151.0 |
| protein of unknown function | SAMN06297358_0436 | Not Available | Negative | 512548 - 512940 | 14023.0 |
| pyruvate/2-oxoglutarate/acetoin dehydrogenase complex, dehydrogenase (e1) component | SAMN06297358_0437 | Not Available | Positive | 513083 - 515506 | 89649.4 |
| hypothetical protein | SAMN06297358_0438 | Not Available | Negative | 515565 - 516173 | 23150.5 |
| chorismate synthase | SAMN06297358_0439 | Not Available | Negative | 516232 - 517329 | 39051.5 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | SAMN06297358_0440 | Not Available | Negative | 517420 - 518694 | 46598.2 |
| 3-deoxy-d-arabinoheptulosonate-7-phosphate synthase | SAMN06297358_0441 | Not Available | Negative | 518896 - 520038 | 42154.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

