Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyl hydrolases family 28 | SAMN06297358_0422 | Not Available | Positive | 494739 - 496097 | 50129.9 |
| hypothetical protein | SAMN06297358_0423 | Not Available | Negative | 496263 - 496766 | 19676.7 |
| hypothetical protein | SAMN06297358_0424 | Not Available | Positive | 497084 - 497539 | 17256.6 |
| Tmrna,resume consensus sequence (at 91): aataattggcgaaaataa | Not Available | Not Available | Positive | 497583 - 497950 | Not Available |
| tldd protein | SAMN06297358_0426 | Not Available | Negative | 498180 - 499763 | 58044.0 |
| predicted zn-dependent protease or its inactivated homolog | SAMN06297358_0427 | Not Available | Negative | 499889 - 501205 | 47585.6 |
| tldd protein | SAMN06297358_0428 | Not Available | Negative | 501208 - 502842 | 60036.0 |
| hypothetical protein | SAMN06297358_0429 | Not Available | Negative | 503241 - 505031 | 67857.5 |
| hypothetical protein | SAMN06297358_0430 | Not Available | Negative | 505031 - 507163 | 79710.7 |
| n-terminal double-transmembrane domain-containing protein | SAMN06297358_0431 | Not Available | Negative | 507165 - 508520 | 51286.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

