Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dtdp-glucose 4,6-dehydratase | SAMN06297358_4274 | Not Available | Positive | 4949790 - 4950779 | 37239.6 |
| udp-glucose 4-epimerase | SAMN06297358_4275 | Not Available | Positive | 4950782 - 4951798 | 37455.3 |
| hypothetical protein | SAMN06297358_4276 | Not Available | Positive | 4951887 - 4952456 | 22057.2 |
| tyrosine-protein phosphatase ywqe | SAMN06297358_4277 | Not Available | Positive | 4952517 - 4953254 | 27869.5 |
| putative abc transport system permease protein | SAMN06297358_4278 | Not Available | Negative | 4953277 - 4954509 | 43656.7 |
| iron-sulfur cluster assembly protein | SAMN06297358_4279 | Not Available | Negative | 4954635 - 4954988 | 12779.1 |
| hypothetical protein | SAMN06297358_4280 | Not Available | Positive | 4955082 - 4955612 | 19969.5 |
| methylmalonyl-coa mutase | SAMN06297358_4281 | Not Available | Positive | 4955788 - 4957332 | 56918.8 |
| chromosomal replication initiator protein dnaa | SAMN06297358_4282 | Not Available | Positive | 4957528 - 4958958 | 53759.9 |
| 8-oxo-dgtp pyrophosphatase mutt, nudix family | SAMN06297358_4283 | Not Available | Negative | 4959272 - 4959811 | 20526.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

