Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06297358_0412 | Not Available | Positive | 483691 - 485406 | 62402.8 |
| hypothetical protein | SAMN06297358_0413 | Not Available | Positive | 485406 - 487118 | 62488.2 |
| alkanesulfonate monooxygenase | SAMN06297358_0414 | Not Available | Positive | 487122 - 488285 | 43419.2 |
| amino acid/polyamine/organocation transporter, apc superfamily | SAMN06297358_0415 | Not Available | Positive | 488290 - 489714 | 51963.8 |
| hypothetical protein | SAMN06297358_0416 | Not Available | Positive | 489856 - 490752 | 33533.5 |
| hypothetical protein | SAMN06297358_0417 | Not Available | Positive | 490885 - 491334 | 17362.8 |
| threonine/homoserine efflux transporter rhta | SAMN06297358_0418 | Not Available | Negative | 491444 - 492346 | 33715.4 |
| transcriptional regulator, marr family with acetyltransferase activity | SAMN06297358_0419 | Not Available | Positive | 492766 - 493722 | 35878.3 |
| cupin domain-containing protein | SAMN06297358_0420 | Not Available | Positive | 493733 - 494056 | 12186.6 |
| hypothetical protein | SAMN06297358_0421 | Not Available | Positive | 494068 - 494358 | 11019.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

