Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06297358_4264 | Not Available | Positive | 4941055 - 4941612 | 21572.2 |
| hypothetical protein | SAMN06297358_4265 | Not Available | Positive | 4941616 - 4942023 | 15523.6 |
| putative auto-transporter adhesin, head gin domain | SAMN06297358_4266 | Not Available | Negative | 4942172 - 4942882 | 24786.3 |
| pyrimidine operon attenuation protein / uracil phosphoribosyltransferase | SAMN06297358_4267 | Not Available | Positive | 4943012 - 4943521 | 19399.8 |
| fic family protein | SAMN06297358_4268 | Not Available | Negative | 4943558 - 4944514 | 36667.9 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | SAMN06297358_4269 | Not Available | Positive | 4944613 - 4945464 | 32344.4 |
| ferrochelatase | SAMN06297358_4270 | Not Available | Positive | 4945592 - 4946602 | 38334.2 |
| haloacid dehalogenase superfamily, subfamily ia, variant 3 with third motif having dd or ed | SAMN06297358_4271 | Not Available | Positive | 4946603 - 4947211 | 21983.6 |
| 3-deoxy-d-manno-octulosonic-acid transferase | SAMN06297358_4272 | Not Available | Negative | 4947208 - 4948413 | 45739.4 |
| udp-glucose dehydrogenase | SAMN06297358_4273 | Not Available | Positive | 4948479 - 4949789 | 47887.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

