Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane associated serine protease, rhomboid family | SAMN06297358_4253 | Not Available | Positive | 4929521 - 4930357 | 30608.9 |
| metal-dependent hydrolase, endonuclease/exonuclease/phosphatase family | SAMN06297358_4254 | Not Available | Positive | 4930357 - 4931496 | 43640.4 |
| cysteinyl-trna synthetase | SAMN06297358_4256 | Not Available | Positive | 4931777 - 4933237 | 55152.8 |
| peptidase family m28 | SAMN06297358_4257 | Not Available | Positive | 4933304 - 4934287 | 36452.6 |
| hypothetical protein | SAMN06297358_4258 | Not Available | Positive | 4934423 - 4935283 | 31544.5 |
| glycerophosphoryl diester phosphodiesterase | SAMN06297358_4259 | Not Available | Positive | 4935435 - 4936328 | 34041.7 |
| copper chaperone | SAMN06297358_4260 | Not Available | Negative | 4936414 - 4936623 | 7665.09 |
| cu2+-exporting atpase | SAMN06297358_4261 | Not Available | Negative | 4936723 - 4939143 | 87044.1 |
| hypothetical protein | SAMN06297358_4262 | Not Available | Positive | 4939338 - 4939448 | 4027.8 |
| 23s rrna (uracil1939-c5)-methyltransferase | SAMN06297358_4263 | Not Available | Positive | 4939582 - 4941012 | 53829.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

