Pedobacter xixiisoli

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Sphingobacteriia

Order

Sphingobacteriales

Family

Sphingobacteriaceae

Genus

Pedobacter

Description

Pedobacter xixiisoli is a bacterial species characterized by the presence of flagella, which suggests it has the capability for motility. This feature is significant for its ecological interactions, potentially aiding in nutrient acquisition and colonization within its environment. The genome of Pedobacter xixiisoli is comprised of a single replicon, indicating a streamlined genetic structure that may contribute to its adaptability in various habitats. The specific accession number for its genomic information is OCMT00000000.1, which allows for further exploration and study of its genetic characteristics and functions. Understanding the motility of Pedobacter xixiisoli through its flagella can provide insights into its ecological role, particularly in soil ecosystems where it may interact with other microorganisms and contribute to nutrient cycling. The presence of a single replicon may suggest a level of genetic efficiency that could be advantageous in fluctuating environmental conditions. Overall, the traits of Pedobacter xixiisoli indicate that it is well-suited for its ecological niche, leveraging motility and streamlined genetics to thrive in its surroundings.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassSphingobacteriia
OrderSphingobacteriales
FamilySphingobacteriaceae
GenusPedobacter
SpeciesPedobacter xixiisoli
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pedobacter xixiisoli strain CGMCC 1.12803 genome assembly, contig:

Gene Summary

Adenine Count

1550273 bp

Thymine Count

1549681 bp

Guanine Count

942263 bp

Cytosine Count

932424 bp

Genome Length

4974702 bp

Protein-coding Genes

4166 genes

Non-Coding Genes

48 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
atp synthase f0 subcomplex a subunitSAMN06297358_4222Not AvailablePositive4894785 - 489596343382.1
f-type h+-transporting atpase subunit cSAMN06297358_4223Not AvailablePositive4896005 - 48962116526.24
atp synthase f0 subcomplex b subunitSAMN06297358_4224Not AvailablePositive4896307 - 489680118525.6
atp synthase f1 subcomplex delta subunitSAMN06297358_4225Not AvailablePositive4896874 - 489741019289.3
f-type h+-transporting atpase subunit alphaSAMN06297358_4227Not AvailablePositive4897635 - 489920956541.2
atp synthase f1 subcomplex gamma subunitSAMN06297358_4228Not AvailablePositive4899303 - 490018732126.7
5'-nucleotidase, lipoprotein e(p4) familySAMN06297358_4229Not AvailablePositive4900470 - 490124329480.0
hypothetical proteinSAMN06297358_4230Not AvailablePositive4901308 - 49015267840.75
protein of unknown functionSAMN06297358_4231Not AvailablePositive4901805 - 490268333240.9
pa domain-containing proteinSAMN06297358_4232Not AvailablePositive4902882 - 490433652348.1

Displaying genes 4141 – 4150 of 4214 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.