Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uroporphyrinogen-iii synthase | SAMN06297358_4212 | Not Available | Positive | 4880964 - 4881731 | 29303.2 |
| gliding motility-associated lipoprotein gldk | SAMN06297358_4213 | Not Available | Positive | 4882085 - 4883404 | 50268.5 |
| gliding motility-associated protein gldl | SAMN06297358_4214 | Not Available | Positive | 4883464 - 4884270 | 28536.2 |
| gliding motility-associated protein gldm | SAMN06297358_4215 | Not Available | Positive | 4884307 - 4885830 | 53921.7 |
| gliding motility associated protien gldn | SAMN06297358_4216 | Not Available | Positive | 4885837 - 4886763 | 35243.2 |
| excinuclease abc subunit c | SAMN06297358_4217 | Not Available | Negative | 4886880 - 4888688 | 69603.4 |
| penicillin-binding protein 1a | SAMN06297358_4218 | Not Available | Negative | 4888771 - 4891017 | 84097.9 |
| hypothetical protein | SAMN06297358_4219 | Not Available | Negative | 4891007 - 4894018 | 113412.0 |
| putative f0f1-atpase subunit ca2+/mg2+ transporter | SAMN06297358_4220 | Not Available | Positive | 4894123 - 4894338 | 7948.73 |
| hypothetical protein | SAMN06297358_4221 | Not Available | Positive | 4894387 - 4894767 | 14462.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

