Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06297358_4202 | Not Available | Negative | 4870773 - 4872038 | 47828.7 |
| protein of unknown function | SAMN06297358_4203 | Not Available | Negative | 4872091 - 4872882 | 29476.0 |
| maltose o-acetyltransferase | SAMN06297358_4204 | Not Available | Negative | 4872952 - 4873563 | 22795.1 |
| cupin-like domain-containing protein | SAMN06297358_4205 | Not Available | Negative | 4873990 - 4874868 | 34026.1 |
| short-chain dehydrogenase | SAMN06297358_4206 | Not Available | Negative | 4875082 - 4875888 | 29682.4 |
| c-5 sterol desaturase | SAMN06297358_4207 | Not Available | Negative | 4875857 - 4876672 | 32193.2 |
| oxygen-independent coproporphyrinogen-3 oxidase | SAMN06297358_4208 | Not Available | Negative | 4876719 - 4877852 | 42716.8 |
| hypothetical protein | SAMN06297358_4209 | Not Available | Positive | 4877930 - 4878208 | 10159.9 |
| outer membrane protein assembly factor bama | SAMN06297358_4210 | Not Available | Positive | 4878254 - 4879984 | 65039.9 |
| protein of unknown function | SAMN06297358_4211 | Not Available | Positive | 4879986 - 4880948 | 36105.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

