Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06297358_4182 | Not Available | Positive | 4850495 - 4850671 | 6905.82 |
| hypothetical protein | SAMN06297358_4183 | Not Available | Positive | 4850829 - 4851074 | 8670.9 |
| tigr02453 family protein | SAMN06297358_4184 | Not Available | Positive | 4851158 - 4851820 | 25622.7 |
| chemotaxis protein motb | SAMN06297358_4185 | Not Available | Positive | 4851843 - 4852685 | 31308.6 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | SAMN06297358_4186 | Not Available | Negative | 4852802 - 4853356 | 20929.6 |
| protein of unknown function | SAMN06297358_4187 | Not Available | Negative | 4853360 - 4853662 | 11537.9 |
| tetratricopeptide repeat-containing protein | SAMN06297358_4188 | Not Available | Negative | 4853714 - 4855516 | 68725.5 |
| dipeptidyl aminopeptidase/acylaminoacyl peptidase | SAMN06297358_4189 | Not Available | Positive | 4855774 - 4857669 | 72742.7 |
| two-component system, ompr family, phosphate regulon sensor histidine kinase phor | SAMN06297358_4190 | Not Available | Positive | 4857672 - 4859348 | 64083.7 |
| two-component system, ompr family, response regulator mtra | SAMN06297358_4191 | Not Available | Positive | 4859476 - 4860168 | 26475.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

