Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| quinol:cytochrome c oxidoreductase iron-sulfur protein precursor | SAMN06297358_4162 | Not Available | Positive | 4824920 - 4827961 | 111896.0 |
| quinol:cytochrome c oxidoreductase quinone-binding subunit 1 | SAMN06297358_4163 | Not Available | Positive | 4827986 - 4829458 | 55804.5 |
| quinol:cytochrome c oxidoreductase membrane protein | SAMN06297358_4164 | Not Available | Positive | 4829461 - 4829997 | 19888.1 |
| quinol:cytochrome c oxidoreductase monoheme cytochrome subunit | SAMN06297358_4165 | Not Available | Positive | 4829969 - 4830577 | 22079.3 |
| quinol:cytochrome c oxidoreductase quinone-binding subunit 2 | SAMN06297358_4166 | Not Available | Positive | 4830593 - 4831834 | 47247.6 |
| cytochrome c oxidase subunit 2 | SAMN06297358_4167 | Not Available | Positive | 4831894 - 4833147 | 46821.1 |
| cytochrome c oxidase subunit 1 | SAMN06297358_4168 | Not Available | Positive | 4833169 - 4835040 | 70345.7 |
| cytochrome c oxidase assembly protein subunit 15 | SAMN06297358_4169 | Not Available | Positive | 4835136 - 4836197 | 39934.7 |
| protoheme ix farnesyltransferase | SAMN06297358_4170 | Not Available | Positive | 4836208 - 4837110 | 33392.8 |
| cytochrome c oxidase subunit 3 | SAMN06297358_4171 | Not Available | Positive | 4837112 - 4837690 | 21638.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

