Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06297358_4141 | Not Available | Negative | 4807044 - 4807352 | 11567.5 |
| hypothetical protein | SAMN06297358_4142 | Not Available | Negative | 4807470 - 4808174 | 26146.8 |
| cold-shock dna-binding protein family | SAMN06297358_4144 | Not Available | Negative | 4808503 - 4808958 | 17167.4 |
| protein of unknown function | SAMN06297358_4145 | Not Available | Negative | 4809220 - 4809915 | 25969.2 |
| signal peptidase ii | SAMN06297358_4146 | Not Available | Negative | 4810170 - 4810772 | 22825.1 |
| transcriptional regulator, trar/dksa family | SAMN06297358_4147 | Not Available | Negative | 4810772 - 4811155 | 14395.0 |
| isoleucyl-trna synthetase | SAMN06297358_4148 | Not Available | Negative | 4811231 - 4814623 | 128517.0 |
| hypothetical protein | SAMN06297358_4149 | Not Available | Positive | 4814903 - 4815163 | 9232.57 |
| protein of unknown function | SAMN06297358_4150 | Not Available | Negative | 4815185 - 4815712 | 20476.8 |
| hypothetical protein | SAMN06297358_4151 | Not Available | Negative | 4815773 - 4818130 | 87377.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

