Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad+ synthase (glutamine-hydrolysing) | SAMN06297358_4129 | Not Available | Positive | 4796096 - 4797736 | 60891.4 |
| signal peptidase ii | SAMN06297358_4131 | Not Available | Negative | 4798039 - 4798563 | 19401.3 |
| apolipoprotein n-acyltransferase | SAMN06297358_4132 | Not Available | Negative | 4798587 - 4800218 | 60985.6 |
| short c-terminal domain-containing protein | SAMN06297358_4134 | Not Available | Negative | 4801034 - 4801681 | 24410.6 |
| 16s rrna (cytidine1402-2'-o)-methyltransferase | SAMN06297358_4135 | Not Available | Negative | 4801674 - 4802405 | 27538.2 |
| seryl-trna synthetase | SAMN06297358_4136 | Not Available | Positive | 4802510 - 4803781 | 47635.6 |
| hypothetical protein | SAMN06297358_4137 | Not Available | Negative | 4803778 - 4804371 | 22384.1 |
| hypothetical protein | SAMN06297358_4138 | Not Available | Negative | 4804514 - 4805779 | 46731.6 |
| ycei-like domain-containing protein | SAMN06297358_4139 | Not Available | Negative | 4805807 - 4806409 | 21766.4 |
| hypothetical protein | SAMN06297358_4140 | Not Available | Negative | 4806563 - 4806871 | 11627.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

