Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartate kinase | SAMN06297358_4119 | Not Available | Negative | 4786819 - 4789266 | 89429.1 |
| predicted nucleic acid-binding protein, contains pin domain | SAMN06297358_4120 | Not Available | Negative | 4789556 - 4789978 | 16017.6 |
| post-segregation antitoxin ccda | SAMN06297358_4121 | Not Available | Negative | 4789968 - 4790213 | 9763.67 |
| acetyltransferase (gnat) family protein | SAMN06297358_4122 | Not Available | Negative | 4790241 - 4790702 | 17586.0 |
| aminomethyltransferase | SAMN06297358_4123 | Not Available | Positive | 4790824 - 4791906 | 39727.4 |
| 2-phosphosulfolactate phosphatase | SAMN06297358_4124 | Not Available | Positive | 4791984 - 4792697 | 26058.5 |
| rep element-mobilizing transposase rayt | SAMN06297358_4125 | Not Available | Negative | 4792701 - 4793276 | 22484.8 |
| nte family protein | SAMN06297358_4126 | Not Available | Negative | 4793326 - 4794105 | 28538.1 |
| gliding motility-associated lipoprotein gldb | SAMN06297358_4127 | Not Available | Negative | 4794204 - 4795241 | 40382.5 |
| outer membrane protein beta-barrel domain-containing protein | SAMN06297358_4128 | Not Available | Positive | 4795354 - 4796013 | 23794.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

