Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ferrous iron transport protein b | SAMN06297358_4109 | Not Available | Positive | 4769547 - 4771670 | 78177.1 |
| sprt-like family protein | SAMN06297358_4110 | Not Available | Positive | 4771740 - 4772342 | 23378.2 |
| dna-binding transcriptional regulator, xre-family hth domain | SAMN06297358_4111 | Not Available | Negative | 4772330 - 4772626 | 11456.1 |
| 2-oxoisovalerate dehydrogenase e1 component | SAMN06297358_4112 | Not Available | Negative | 4772896 - 4774872 | 73428.2 |
| glucose 1-dehydrogenase | SAMN06297358_4113 | Not Available | Negative | 4774942 - 4775721 | 28546.7 |
| por secretion system c-terminal sorting domain-containing protein | SAMN06297358_4114 | Not Available | Negative | 4776006 - 4777259 | 44184.9 |
| hypothetical protein | SAMN06297358_4115 | Not Available | Positive | 4782174 - 4782287 | 4276.4 |
| l-lactate dehydrogenase complex protein lldf | SAMN06297358_4116 | Not Available | Negative | 4782722 - 4784110 | 52202.0 |
| threonine synthase | SAMN06297358_4117 | Not Available | Negative | 4784422 - 4785729 | 48023.1 |
| homoserine kinase | SAMN06297358_4118 | Not Available | Negative | 4785815 - 4786789 | 34670.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

