Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartyl/glutamyl-trna(asn/gln) amidotransferase subunit a | SAMN06297358_4099 | Not Available | Positive | 4751212 - 4752663 | 52464.4 |
| membrane-bound lytic murein transglycosylase d | SAMN06297358_4100 | Not Available | Positive | 4752726 - 4754126 | 52430.1 |
| hypothetical protein | SAMN06297358_4101 | Not Available | Positive | 4754140 - 4754541 | 15127.5 |
| allosteric nadp-dependent malic enzyme | SAMN06297358_4102 | Not Available | Positive | 4754948 - 4757257 | 84566.8 |
| holliday junction dna helicase subunit ruva | SAMN06297358_4103 | Not Available | Positive | 4757350 - 4757934 | 21321.2 |
| cell surface protein spra | SAMN06297358_4104 | Not Available | Positive | 4757945 - 4765117 | 269100.0 |
| glycine cleavage system h protein | SAMN06297358_4105 | Not Available | Positive | 4765229 - 4765609 | 13508.7 |
| vanz like family protein | SAMN06297358_4106 | Not Available | Positive | 4765611 - 4766021 | 15703.3 |
| outer membrane receptor proteins, mostly fe transport | SAMN06297358_4107 | Not Available | Positive | 4766288 - 4769080 | 102633.0 |
| ferrous iron transport protein a | SAMN06297358_4108 | Not Available | Positive | 4769327 - 4769542 | 7646.55 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

