Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytosine/adenosine deaminase | SAMN06297358_4089 | Not Available | Positive | 4742023 - 4743186 | 43166.5 |
| enoyl-[acyl-carrier protein] reductase ii | SAMN06297358_4090 | Not Available | Positive | 4743186 - 4744133 | 33665.0 |
| acylphosphatase | SAMN06297358_4091 | Not Available | Positive | 4744347 - 4744631 | 10558.9 |
| membrane protein involved in the export of o-antigen and teichoic acid | SAMN06297358_4092 | Not Available | Positive | 4744782 - 4746236 | 55898.5 |
| dutp pyrophosphatase | SAMN06297358_4093 | Not Available | Positive | 4746283 - 4746717 | 15855.0 |
| tetratricopeptide repeat-containing protein | SAMN06297358_4094 | Not Available | Positive | 4746785 - 4748476 | 63316.9 |
| protein of unknown function | SAMN06297358_4095 | Not Available | Positive | 4748454 - 4749248 | 29005.3 |
| septal ring factor envc, activator of murein hydrolases amia and amib | SAMN06297358_4096 | Not Available | Positive | 4749268 - 4750545 | 47586.1 |
| twin arginine-targeting protein translocase, tata/e family | SAMN06297358_4097 | Not Available | Positive | 4750595 - 4750960 | 13636.0 |
| sec-independent protein translocase protein tata | SAMN06297358_4098 | Not Available | Positive | 4750987 - 4751181 | 6897.69 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

