Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flotillin | SAMN06297358_4078 | Not Available | Negative | 4730024 - 4731559 | 55332.3 |
| hypothetical protein | SAMN06297358_4079 | Not Available | Negative | 4731563 - 4732129 | 20823.5 |
| 23s rrna pseudouridine2604 synthase | SAMN06297358_4080 | Not Available | Negative | 4732266 - 4733252 | 36333.6 |
| dinb family protein | SAMN06297358_4081 | Not Available | Negative | 4733455 - 4733952 | 18594.4 |
| wyl domain-containing protein | SAMN06297358_4083 | Not Available | Negative | 4734382 - 4735071 | 26684.3 |
| signal transduction histidine kinase | SAMN06297358_4084 | Not Available | Positive | 4735198 - 4737675 | 93394.3 |
| hypothetical protein | SAMN06297358_4085 | Not Available | Positive | 4737804 - 4738592 | 28555.0 |
| two-component system, ntrc family, response regulator hydg | SAMN06297358_4086 | Not Available | Negative | 4738656 - 4739975 | 49052.1 |
| hypothetical protein | SAMN06297358_4087 | Not Available | Negative | 4740053 - 4740628 | 20485.1 |
| hypothetical protein | SAMN06297358_4088 | Not Available | Negative | 4741225 - 4741794 | 20271.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

