Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pas domain s-box-containing protein | SAMN06297358_4068 | Not Available | Positive | 4717411 - 4720170 | 103616.0 |
| hypothetical protein | SAMN06297358_4069 | Not Available | Negative | 4720284 - 4721669 | 50838.5 |
| comf family protein | SAMN06297358_4070 | Not Available | Negative | 4721746 - 4722444 | 26171.0 |
| hypothetical protein | SAMN06297358_4071 | Not Available | Negative | 4722653 - 4723318 | 25545.6 |
| hypothetical protein | SAMN06297358_4072 | Not Available | Negative | 4723324 - 4723920 | 23085.6 |
| rep element-mobilizing transposase rayt | SAMN06297358_4073 | Not Available | Negative | 4724025 - 4724576 | 21711.0 |
| hypothetical protein | SAMN06297358_4074 | Not Available | Negative | 4724675 - 4725370 | 27642.4 |
| rep element-mobilizing transposase rayt | SAMN06297358_4075 | Not Available | Negative | 4725510 - 4726100 | 23374.0 |
| pqq-like domain-containing protein | SAMN06297358_4076 | Not Available | Positive | 4726864 - 4728807 | 73111.6 |
| 23s rrna m(2)a-2503 methyltransferase | SAMN06297358_4077 | Not Available | Negative | 4728892 - 4729941 | 39592.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

