Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06297358_0028 | Not Available | Negative | 30783 - 30980 | 7401.41 |
| hexosaminidase | SAMN06297358_0029 | Not Available | Negative | 31405 - 33111 | 65077.4 |
| small subunit ribosomal protein s1 | SAMN06297358_0030 | Not Available | Negative | 33474 - 35405 | 71382.9 |
| hypothetical protein | SAMN06297358_0031 | Not Available | Positive | 35488 - 35742 | 9711.72 |
| hypothetical protein | SAMN06297358_0032 | Not Available | Negative | 35983 - 36798 | 31942.5 |
| protein of unknown function | SAMN06297358_0033 | Not Available | Negative | 36743 - 37570 | 31416.4 |
| uncharacterized protein | SAMN06297358_0034 | Not Available | Negative | 37637 - 39109 | 53925.0 |
| cytidylate kinase | SAMN06297358_0035 | Not Available | Negative | 39117 - 39797 | 25516.5 |
| ribosome-associated protein | SAMN06297358_0036 | Not Available | Positive | 39856 - 40266 | 15351.7 |
| hypothetical protein | SAMN06297358_0037 | Not Available | Negative | 40292 - 40657 | 14331.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

