Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-2-acetamido-3-amino-2,3-dideoxy-glucuronate n-acetyltransferase | SAMN06297358_4048 | Not Available | Positive | 4693834 - 4694412 | 20512.7 |
| predicted dehydrogenase | SAMN06297358_4049 | Not Available | Positive | 4694433 - 4695485 | 39352.8 |
| chain length determinant protein | SAMN06297358_4050 | Not Available | Positive | 4695510 - 4696613 | 41251.6 |
| peptidoglycan biosynthesis protein mvin/murj, putative lipid ii flippase | SAMN06297358_4051 | Not Available | Positive | 4696614 - 4698107 | 56110.0 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN06297358_4052 | Not Available | Positive | 4698104 - 4699198 | 41946.3 |
| hypothetical protein | SAMN06297358_4053 | Not Available | Positive | 4699203 - 4700108 | 34308.4 |
| epsg family protein | SAMN06297358_4054 | Not Available | Positive | 4700109 - 4701188 | 41008.6 |
| hypothetical protein | SAMN06297358_4055 | Not Available | Positive | 4701221 - 4702165 | 36566.1 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN06297358_4056 | Not Available | Positive | 4702200 - 4703285 | 41769.5 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN06297358_4057 | Not Available | Positive | 4703290 - 4704279 | 38337.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

