Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna (guanine37-n1)-methyltransferase | SAMN06297358_4037 | Not Available | Negative | 4680413 - 4681087 | 25097.1 |
| por secretion system c-terminal sorting domain-containing protein | SAMN06297358_4038 | Not Available | Positive | 4681227 - 4684454 | 116648.0 |
| hypothetical protein | SAMN06297358_4039 | Not Available | Negative | 4684451 - 4685092 | 24330.8 |
| 16s rrna processing protein rimm | SAMN06297358_4040 | Not Available | Negative | 4685135 - 4685662 | 20490.2 |
| small subunit ribosomal protein s16 | SAMN06297358_4041 | Not Available | Negative | 4685774 - 4686349 | 20535.1 |
| 5'(3')-deoxyribonucleotidase | SAMN06297358_4043 | Not Available | Positive | 4686850 - 4687368 | 20411.5 |
| gdpmannose 4,6-dehydratase | SAMN06297358_4044 | Not Available | Positive | 4687831 - 4688967 | 43105.7 |
| protein involved in polysaccharide export, contains slbb domain of the beta-grasp fold | SAMN06297358_4045 | Not Available | Positive | 4689009 - 4691441 | 89397.2 |
| udp-n-acetyl-d-galactosamine dehydrogenase | SAMN06297358_4046 | Not Available | Positive | 4691444 - 4692721 | 47020.4 |
| dtdp-4-amino-4,6-dideoxygalactose transaminase | SAMN06297358_4047 | Not Available | Positive | 4692708 - 4693844 | 41892.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

