Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fe-s cluster biogenesis protein nfua, 4fe-4s-binding domain | SAMN06297358_4027 | Not Available | Negative | 4671111 - 4671356 | 8663.67 |
| atp-binding protein involved in chromosome partitioning | SAMN06297358_4028 | Not Available | Negative | 4671392 - 4672471 | 38685.1 |
| transglycosylase | SAMN06297358_4029 | Not Available | Positive | 4672623 - 4674782 | 80969.0 |
| hypoxanthine phosphoribosyltransferase | SAMN06297358_4030 | Not Available | Positive | 4674772 - 4675311 | 20283.5 |
| fic family protein | SAMN06297358_4031 | Not Available | Negative | 4675308 - 4676285 | 37825.1 |
| phosphatidylserine decarboxylase | SAMN06297358_4032 | Not Available | Positive | 4676392 - 4677051 | 25027.5 |
| hypothetical protein | SAMN06297358_4033 | Not Available | Positive | 4677285 - 4677413 | 4746.87 |
| mscs family membrane protein | SAMN06297358_4034 | Not Available | Negative | 4677395 - 4678534 | 42745.9 |
| glutamate dehydrogenase/leucine dehydrogenase | SAMN06297358_4035 | Not Available | Negative | 4678538 - 4679764 | 45132.1 |
| large subunit ribosomal protein l19 | SAMN06297358_4036 | Not Available | Negative | 4679915 - 4680262 | 13035.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

