Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix | SAMN06297358_4006 | Not Available | Negative | 4644935 - 4645165 | 9112.11 |
| putative n6-adenine-specific dna methylase | SAMN06297358_4007 | Not Available | Negative | 4645274 - 4646461 | 44710.6 |
| protein of unknown function | SAMN06297358_4008 | Not Available | Positive | 4646501 - 4646899 | 14654.0 |
| two-component system, ompr family, phosphate regulon sensor histidine kinase phor | SAMN06297358_4009 | Not Available | Positive | 4647074 - 4648873 | 68526.2 |
| dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domain | SAMN06297358_4010 | Not Available | Positive | 4648883 - 4649575 | 26434.1 |
| glpgli family protein | SAMN06297358_4011 | Not Available | Negative | 4649696 - 4650478 | 29370.0 |
| carboxypeptidase regulatory-like domain-containing protein | SAMN06297358_4012 | Not Available | Negative | 4650495 - 4653275 | 104165.0 |
| helicase | SAMN06297358_4013 | Not Available | Positive | 4653477 - 4655765 | 86774.5 |
| efflux transporter, outer membrane factor (omf) lipoprotein, nodt family | SAMN06297358_4014 | Not Available | Negative | 4655980 - 4657389 | 51484.2 |
| hydrophobic/amphiphilic exporter-1, hae1 family | SAMN06297358_4015 | Not Available | Negative | 4657404 - 4660580 | 114537.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

