Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbamoyl-phosphate synthase large subunit | SAMN06297358_3996 | Not Available | Negative | 4632260 - 4635157 | 107030.0 |
| glucose/arabinose dehydrogenase, beta-propeller fold | SAMN06297358_3997 | Not Available | Positive | 4635434 - 4636753 | 47089.8 |
| nicotinamide mononucleotide transporter | SAMN06297358_3998 | Not Available | Positive | 4637346 - 4637987 | 25131.2 |
| nicotinamide-nucleotide adenylyltransferase, nadr type | SAMN06297358_3999 | Not Available | Positive | 4637950 - 4638507 | 21308.4 |
| inorganic phosphate transporter, pit family | SAMN06297358_4000 | Not Available | Negative | 4638590 - 4639885 | 46784.0 |
| hypothetical protein | SAMN06297358_4001 | Not Available | Negative | 4639892 - 4640533 | 24021.8 |
| two-component system, ompr family, phosphate regulon sensor histidine kinase phor | SAMN06297358_4002 | Not Available | Negative | 4640680 - 4641732 | 40636.2 |
| probable dna metabolism protein | SAMN06297358_4003 | Not Available | Negative | 4641995 - 4642750 | 30093.1 |
| putative dna modification/repair radical sam protein | SAMN06297358_4004 | Not Available | Negative | 4642831 - 4644087 | 47756.9 |
| uncharacterized protein | SAMN06297358_4005 | Not Available | Negative | 4644137 - 4644784 | 24331.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

