Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phnb protein | SAMN06297358_3986 | Not Available | Negative | 4620491 - 4620922 | 16136.9 |
| lamin tail domain | SAMN06297358_3987 | Not Available | Negative | 4621057 - 4621812 | 26938.4 |
| hypothetical protein | SAMN06297358_3988 | Not Available | Negative | 4621851 - 4623122 | 46200.2 |
| hypothetical protein | SAMN06297358_3989 | Not Available | Negative | 4623197 - 4624558 | 50656.7 |
| hypothetical protein | SAMN06297358_3990 | Not Available | Negative | 4624564 - 4625451 | 33460.9 |
| aerobic c4-dicarboxylate transport protein | SAMN06297358_3991 | Not Available | Negative | 4625500 - 4626750 | 44025.6 |
| hypothetical protein | SAMN06297358_3992 | Not Available | Positive | 4627113 - 4628270 | 44164.9 |
| bacterial peptide chain release factor 3 (brf-3) | SAMN06297358_3993 | Not Available | Negative | 4628359 - 4629939 | 60001.5 |
| lema protein | SAMN06297358_3994 | Not Available | Positive | 4630506 - 4631063 | 20686.1 |
| protein of unknown function | SAMN06297358_3995 | Not Available | Positive | 4631063 - 4632007 | 35662.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

