Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipoprotein-releasing system permease protein | SAMN06297358_3976 | Not Available | Positive | 4605716 - 4606951 | 45366.8 |
| nlpe-like protein with ob domain | SAMN06297358_3977 | Not Available | Positive | 4606955 - 4607341 | 14179.8 |
| 1,4-dihydroxy-6-naphthoate synthase | SAMN06297358_3978 | Not Available | Negative | 4607649 - 4608503 | 31761.2 |
| pas domain s-box-containing protein | SAMN06297358_3979 | Not Available | Negative | 4608556 - 4609674 | 42420.2 |
| futalosine hydrolase | SAMN06297358_3980 | Not Available | Negative | 4609825 - 4610457 | 22961.4 |
| 6-pyruvoyltetrahydropterin/6- carboxytetrahydropterin synthase | SAMN06297358_3981 | Not Available | Positive | 4610782 - 4611318 | 20713.7 |
| gtp cyclohydrolase i | SAMN06297358_3982 | Not Available | Positive | 4611331 - 4611966 | 24180.1 |
| [acyl-carrier-protein] s-malonyltransferase | SAMN06297358_3983 | Not Available | Positive | 4612135 - 4613019 | 31045.4 |
| hamp domain-containing protein | SAMN06297358_3984 | Not Available | Positive | 4613218 - 4616916 | 141738.0 |
| hypothetical protein | SAMN06297358_3985 | Not Available | Positive | 4616916 - 4620362 | 130032.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

