Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06297358_3966 | Not Available | Positive | 4595813 - 4596487 | 24042.8 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN06297358_3967 | Not Available | Positive | 4596596 - 4597177 | 22819.4 |
| fad/fmn-containing dehydrogenase | SAMN06297358_3968 | Not Available | Positive | 4597258 - 4598721 | 56098.6 |
| aldehyde dehydrogenase (nad+) | SAMN06297358_3969 | Not Available | Negative | 4598764 - 4600392 | 58975.5 |
| putative lumazine-binding | SAMN06297358_3970 | Not Available | Negative | 4600446 - 4600907 | 17494.0 |
| tetratricopeptide repeat-containing protein | SAMN06297358_3971 | Not Available | Positive | 4601149 - 4602552 | 54975.1 |
| phosphosulfolactate synthase | SAMN06297358_3972 | Not Available | Positive | 4602710 - 4603471 | 28672.4 |
| shikimate dehydrogenase | SAMN06297358_3973 | Not Available | Positive | 4603510 - 4604277 | 28622.4 |
| gliding motility-associated lipoprotein gldd | SAMN06297358_3974 | Not Available | Positive | 4604366 - 4604956 | 22822.2 |
| glyoxylase, beta-lactamase superfamily ii | SAMN06297358_3975 | Not Available | Positive | 4605046 - 4605687 | 24007.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

